Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN05444682_10279 | Not Available | Positive | 965976 - 967247 | 47708.1 |
| hlyd family secretion protein | SAMN05444682_10280 | Not Available | Positive | 967268 - 968161 | 32612.0 |
| abc-type multidrug transport system, atpase component | SAMN05444682_10281 | Not Available | Positive | 968213 - 969127 | 33490.6 |
| abc-2 type transport system atp-binding protein | SAMN05444682_10282 | Not Available | Positive | 969124 - 969870 | 27567.3 |
| abc-2 type transport system permease protein | SAMN05444682_10283 | Not Available | Positive | 969876 - 970982 | 41709.6 |
| abc-2 type transport system permease protein | SAMN05444682_10284 | Not Available | Positive | 971039 - 972157 | 42458.2 |
| putative hydrolase of the had superfamily | SAMN05444682_10285 | Not Available | Positive | 972318 - 973022 | 26562.4 |
| atp cone domain-containing protein | SAMN05444682_10286 | Not Available | Positive | 973098 - 973934 | 31860.1 |
| hypothetical protein | SAMN05444682_10287 | Not Available | Positive | 973939 - 974682 | 28043.5 |
| atp-binding cassette, subfamily b | SAMN05444682_10288 | Not Available | Positive | 974685 - 976427 | 65909.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
