Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parallel beta-helix repeat (two copies) | SAMN05444682_10269 | Not Available | Negative | 955695 - 957239 | 55611.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10270 | Not Available | Negative | 957236 - 958237 | 37789.7 |
| o-antigen ligase | SAMN05444682_10271 | Not Available | Negative | 958234 - 959424 | 45504.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10272 | Not Available | Negative | 959411 - 960616 | 45107.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10273 | Not Available | Negative | 960613 - 961719 | 41654.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444682_10274 | Not Available | Negative | 961707 - 962654 | 36782.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444682_10275 | Not Available | Negative | 962647 - 964182 | 56760.0 |
| protein of unknown function | SAMN05444682_10276 | Not Available | Negative | 964231 - 964518 | 10453.7 |
| transcriptional regulator, arac family | SAMN05444682_10277 | Not Available | Positive | 964598 - 965164 | 21331.2 |
| transcriptional regulator, tetr family | SAMN05444682_10278 | Not Available | Positive | 965310 - 965924 | 23324.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
