Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05444682_10259 | Not Available | Negative | 943902 - 944711 | 29704.1 |
| arylsulfatase a | SAMN05444682_10260 | Not Available | Positive | 944767 - 946680 | 72162.3 |
| fructosamine-3-kinase | SAMN05444682_10261 | Not Available | Positive | 946881 - 947780 | 33878.9 |
| putative heme-binding domain-containing protein | SAMN05444682_10262 | Not Available | Positive | 947821 - 950475 | 97143.2 |
| hypothetical protein | SAMN05444682_10263 | Not Available | Positive | 950529 - 951629 | 40195.9 |
| dna-binding transcriptional regulator, lrp family | SAMN05444682_10264 | Not Available | Positive | 951897 - 952358 | 17737.4 |
| Trna-arg | Not Available | Not Available | Positive | 952454 - 952528 | Not Available |
| predicted arabinose efflux permease, mfs family | SAMN05444682_10266 | Not Available | Negative | 952585 - 953859 | 46228.9 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05444682_10267 | Not Available | Negative | 953907 - 954617 | 27620.9 |
| rhamnosyltransferase | SAMN05444682_10268 | Not Available | Negative | 954781 - 955698 | 34022.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
