Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx-like family protein | SAMN05444682_10229 | Not Available | Positive | 907453 - 907815 | 13506.3 |
| thioredoxin-like | SAMN05444682_10230 | Not Available | Negative | 907970 - 908482 | 19460.4 |
| transcriptional regulator, laci family | SAMN05444682_10231 | Not Available | Negative | 908502 - 909488 | 36071.1 |
| acetyl xylan esterase (axe1) | SAMN05444682_10232 | Not Available | Positive | 909733 - 911832 | 77933.8 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05444682_10233 | Not Available | Positive | 911860 - 913299 | 53489.6 |
| glucosamine-6-phosphate deaminase | SAMN05444682_10234 | Not Available | Positive | 913317 - 914057 | 27197.3 |
| glucose/galactose transporter | SAMN05444682_10235 | Not Available | Positive | 914121 - 915431 | 47856.8 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05444682_10236 | Not Available | Positive | 915434 - 916624 | 42975.6 |
| transcriptional regulator, laci family | SAMN05444682_10237 | Not Available | Negative | 916690 - 917706 | 37496.3 |
| xylulokinase | SAMN05444682_10238 | Not Available | Positive | 917827 - 919350 | 55185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
