Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | SAMN05444682_10219 | Not Available | Positive | 895541 - 896371 | 31228.5 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05444682_10220 | Not Available | Positive | 896411 - 897517 | 41136.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05444682_10221 | Not Available | Positive | 897517 - 898776 | 45327.4 |
| chorismate synthase | SAMN05444682_10222 | Not Available | Positive | 898848 - 899951 | 39364.7 |
| glucokinase | SAMN05444682_10223 | Not Available | Positive | 899935 - 900801 | 31887.8 |
| peptide methionine sulfoxide reductase msra/msrb | SAMN05444682_10224 | Not Available | Positive | 900988 - 902124 | 42282.5 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN05444682_10225 | Not Available | Negative | 902121 - 904541 | 89860.7 |
| 4fe-4s dicluster domain-containing protein | SAMN05444682_10226 | Not Available | Positive | 904793 - 906100 | 49102.2 |
| cysteine-rich domain-containing protein | SAMN05444682_10227 | Not Available | Positive | 906157 - 906948 | 29468.6 |
| transcriptional regulator, hxlr family | SAMN05444682_10228 | Not Available | Negative | 907012 - 907353 | 12866.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
