Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101755 | Not Available | Negative | 855013 - 855414 | 14929.7 |
| hypothetical protein | SAMN05444682_101756 | Not Available | Negative | 855418 - 855984 | 22428.5 |
| hypothetical protein | SAMN05444682_101757 | Not Available | Negative | 855981 - 856613 | 24589.3 |
| hypothetical protein | SAMN05444682_101758 | Not Available | Negative | 856579 - 856887 | 11830.4 |
| putative quorum-sensing-regulated virulence factor | SAMN05444682_101759 | Not Available | Negative | 856884 - 857048 | 6219.58 |
| hypothetical protein | SAMN05444682_101760 | Not Available | Negative | 857054 - 857278 | 8406.85 |
| hypothetical protein | SAMN05444682_101761 | Not Available | Negative | 857259 - 857468 | 7932.07 |
| numod4 motif-containing protein | SAMN05444682_101762 | Not Available | Negative | 857465 - 857956 | 18334.2 |
| phage uncharacterized protein tigr01671 | SAMN05444682_101763 | Not Available | Negative | 857953 - 858330 | 14584.0 |
| hypothetical protein | SAMN05444682_101764 | Not Available | Negative | 858327 - 858542 | 8249.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
