Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primary replicative dna helicase | SAMN05444682_101725 | Not Available | Positive | 839728 - 841194 | 54079.4 |
| hypothetical protein | SAMN05444682_101726 | Not Available | Positive | 841250 - 841675 | 16598.1 |
| parb-like nuclease domain-containing protein | SAMN05444682_101727 | Not Available | Positive | 841724 - 842353 | 23021.0 |
| hypothetical protein | SAMN05444682_101728 | Not Available | Positive | 842356 - 842862 | 18881.2 |
| hypothetical protein | SAMN05444682_101729 | Not Available | Positive | 842819 - 844411 | 60329.1 |
| phage portal protein, spp1 family | SAMN05444682_101730 | Not Available | Positive | 844421 - 845863 | 54560.2 |
| hypothetical protein | SAMN05444682_101731 | Not Available | Positive | 845875 - 846018 | 5363.57 |
| hypothetical protein | SAMN05444682_101732 | Not Available | Positive | 846019 - 846219 | 7629.08 |
| hypothetical protein | SAMN05444682_101733 | Not Available | Positive | 846221 - 848020 | 68263.0 |
| hypothetical protein | SAMN05444682_101734 | Not Available | Negative | 848015 - 848293 | 10382.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
