Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101715 | Not Available | Positive | 833356 - 833778 | 16364.6 |
| hypothetical protein | SAMN05444682_101716 | Not Available | Positive | 833810 - 834553 | 28276.0 |
| pcfk-like protein | SAMN05444682_101717 | Not Available | Positive | 834602 - 835015 | 15356.3 |
| pcfj-like protein | SAMN05444682_101718 | Not Available | Positive | 835042 - 836304 | 49699.5 |
| hypothetical protein | SAMN05444682_101719 | Not Available | Positive | 836301 - 837251 | 37584.4 |
| hypothetical protein | SAMN05444682_101720 | Not Available | Positive | 837248 - 837661 | 15750.3 |
| site-specific dna recombinase | SAMN05444682_101721 | Not Available | Positive | 837762 - 838367 | 22921.0 |
| hypothetical protein | SAMN05444682_101722 | Not Available | Positive | 838360 - 838569 | 7935.62 |
| hypothetical protein | SAMN05444682_101723 | Not Available | Positive | 838576 - 838776 | 7488.1 |
| protein of unknown function | SAMN05444682_101724 | Not Available | Positive | 838781 - 839731 | 36644.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
