Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN05444682_101705 | Not Available | Negative | 825720 - 826367 | 24436.5 |
| regulatory protein, luxr family | SAMN05444682_101706 | Not Available | Positive | 826530 - 827111 | 21995.8 |
| hypothetical protein | SAMN05444682_101707 | Not Available | Positive | 827122 - 827382 | 10185.8 |
| hypothetical protein | SAMN05444682_101708 | Not Available | Positive | 827382 - 827741 | 13439.4 |
| hypothetical protein | SAMN05444682_101709 | Not Available | Positive | 827760 - 828020 | 9933.1 |
| hypothetical protein | SAMN05444682_101710 | Not Available | Positive | 828017 - 828256 | 8544.14 |
| aaa domain-containing protein | SAMN05444682_101711 | Not Available | Positive | 828259 - 830295 | 76575.7 |
| recombination protein rect | SAMN05444682_101712 | Not Available | Positive | 830467 - 831582 | 42687.0 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN05444682_101713 | Not Available | Positive | 831585 - 832319 | 27002.2 |
| hypothetical protein | SAMN05444682_101714 | Not Available | Positive | 832333 - 833337 | 38651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
