Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN05444682_101685 | Not Available | Negative | 807351 - 808358 | 37129.7 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN05444682_101686 | Not Available | Negative | 808360 - 809697 | 49037.6 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444682_101687 | Not Available | Positive | 809880 - 811208 | 49670.9 |
| lipoprotein spr | SAMN05444682_101688 | Not Available | Negative | 811213 - 811839 | 23238.0 |
| gtp-binding protein | SAMN05444682_101689 | Not Available | Positive | 811880 - 812530 | 24659.8 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444682_101690 | Not Available | Positive | 812527 - 813375 | 31469.3 |
| dna topoisomerase i | SAMN05444682_101691 | Not Available | Positive | 813427 - 815751 | 87814.6 |
| hypothetical protein | SAMN05444682_101692 | Not Available | Positive | 815802 - 816215 | 15494.6 |
| cytidylate kinase | SAMN05444682_101693 | Not Available | Positive | 816219 - 816881 | 25098.9 |
| aspartate aminotransferase | SAMN05444682_101694 | Not Available | Negative | 816876 - 818072 | 43966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
