Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase-4 | SAMN05444682_10157 | Not Available | Negative | 70178 - 72196 | 78295.1 |
| hypothetical protein | SAMN05444682_10158 | Not Available | Positive | 72294 - 72767 | 18325.7 |
| hypothetical protein | SAMN05444682_10159 | Not Available | Positive | 72786 - 73157 | 14505.3 |
| hypothetical protein | SAMN05444682_10160 | Not Available | Negative | 73184 - 74305 | 43650.2 |
| hypothetical protein | SAMN05444682_10161 | Not Available | Negative | 74324 - 74821 | 18914.8 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05444682_10162 | Not Available | Negative | 74972 - 75556 | 22314.9 |
| protein of unknown function | SAMN05444682_10163 | Not Available | Negative | 75549 - 76001 | 17307.0 |
| hypothetical protein | SAMN05444682_10164 | Not Available | Negative | 76380 - 76628 | 8641.19 |
| hnh endonuclease | SAMN05444682_10165 | Not Available | Negative | 77329 - 78318 | 37637.1 |
| dna-binding transcriptional regulator, xre family | SAMN05444682_10166 | Not Available | Negative | 78323 - 78820 | 19237.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
