Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein terc, possibly involved in tellurium resistance | SAMN05444682_101665 | Not Available | Positive | 789236 - 790018 | 29118.6 |
| hypothetical protein | SAMN05444682_101666 | Not Available | Negative | 790002 - 790145 | 5443.93 |
| putative aminopeptidase frvx | SAMN05444682_101667 | Not Available | Positive | 790203 - 791318 | 41734.0 |
| protein of unknown function | SAMN05444682_101668 | Not Available | Positive | 791351 - 791659 | 11102.2 |
| hypothetical protein | SAMN05444682_101669 | Not Available | Negative | 791661 - 791816 | 5798.65 |
| Trna-arg | Not Available | Not Available | Positive | 791904 - 791977 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 792161 - 792245 | Not Available |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05444682_101672 | Not Available | Negative | 792307 - 793395 | 42394.3 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05444682_101673 | Not Available | Positive | 793596 - 794645 | 38692.1 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05444682_101674 | Not Available | Positive | 794645 - 796360 | 62155.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
