Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101655 | Not Available | Positive | 782018 - 782425 | 14446.2 |
| hypothetical protein | SAMN05444682_101656 | Not Available | Positive | 782675 - 782806 | 5122.23 |
| hypothetical protein | SAMN05444682_101657 | Not Available | Positive | 782908 - 783321 | 14934.7 |
| small subunit ribosomal protein s21 | SAMN05444682_101658 | Not Available | Positive | 783851 - 784042 | 7480.29 |
| integrase/recombinase xerc | SAMN05444682_101659 | Not Available | Positive | 784124 - 785005 | 33752.9 |
| putative sigma-54 modulation protein | SAMN05444682_101660 | Not Available | Positive | 785021 - 785368 | 13356.0 |
| dna uptake protein come | SAMN05444682_101661 | Not Available | Positive | 785475 - 786389 | 35308.6 |
| adenine phosphoribosyltransferase | SAMN05444682_101662 | Not Available | Positive | 786382 - 786909 | 19481.8 |
| hypothetical protein | SAMN05444682_101663 | Not Available | Negative | 786924 - 787856 | 33941.9 |
| acyl-coa dehydrogenase | SAMN05444682_101664 | Not Available | Positive | 788040 - 789191 | 41468.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
