Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101645 | Not Available | Negative | 769860 - 771194 | 51120.3 |
| piwi domain-containing protein | SAMN05444682_101646 | Not Available | Positive | 771352 - 774537 | 121446.0 |
| superfamily ii dna or rna helicase | SAMN05444682_101647 | Not Available | Positive | 774556 - 775830 | 47423.2 |
| transposase zinc-ribbon domain-containing protein | SAMN05444682_101648 | Not Available | Positive | 775867 - 776775 | 34930.0 |
| dihydropteroate synthase | SAMN05444682_101649 | Not Available | Positive | 776847 - 777662 | 28471.1 |
| phosphoglucosamine mutase | SAMN05444682_101650 | Not Available | Positive | 777749 - 778051 | 11074.5 |
| hypothetical protein | SAMN05444682_101651 | Not Available | Negative | 777945 - 778205 | 9762.86 |
| hypothetical protein | SAMN05444682_101652 | Not Available | Positive | 778325 - 779935 | 61394.1 |
| protein of unknown function | SAMN05444682_101653 | Not Available | Negative | 780948 - 781316 | 14199.0 |
| hypothetical protein | SAMN05444682_101654 | Not Available | Positive | 781608 - 781868 | 9861.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
