Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion-system coupling protein dna-binding domain-containing protein | SAMN05444682_101635 | Not Available | Positive | 760968 - 762992 | 75597.8 |
| peptidase family m23 | SAMN05444682_101636 | Not Available | Positive | 762989 - 763513 | 19288.4 |
| hypothetical protein | SAMN05444682_101637 | Not Available | Positive | 763515 - 763673 | 5959.7 |
| antirestriction protein ardc | SAMN05444682_101638 | Not Available | Positive | 763657 - 764889 | 46652.5 |
| protein of unknown function | SAMN05444682_101639 | Not Available | Positive | 764918 - 765733 | 30604.3 |
| hypothetical protein | SAMN05444682_101640 | Not Available | Positive | 765733 - 766353 | 23551.4 |
| hypothetical protein | SAMN05444682_101641 | Not Available | Negative | 766535 - 767617 | 41758.4 |
| hypothetical protein | SAMN05444682_101642 | Not Available | Negative | 767614 - 768897 | 48337.6 |
| hypothetical protein | SAMN05444682_101643 | Not Available | Negative | 768965 - 769222 | 10219.2 |
| rlob-like protein | SAMN05444682_101644 | Not Available | Negative | 769259 - 769873 | 24020.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
