Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteroides conjugation system atpase, trag family | SAMN05444682_101625 | Not Available | Positive | 751375 - 753837 | 93758.6 |
| hypothetical protein | SAMN05444682_101626 | Not Available | Positive | 753834 - 754496 | 24181.7 |
| hypothetical protein | SAMN05444682_101627 | Not Available | Positive | 754493 - 755152 | 25143.7 |
| hypothetical protein | SAMN05444682_101628 | Not Available | Positive | 755149 - 755823 | 25752.7 |
| hypothetical protein | SAMN05444682_101629 | Not Available | Positive | 755826 - 756614 | 30399.4 |
| hypothetical protein | SAMN05444682_101630 | Not Available | Positive | 756633 - 757775 | 42537.4 |
| bacteroides conjugative transposon trak protein | SAMN05444682_101631 | Not Available | Positive | 757798 - 758418 | 23639.5 |
| hypothetical protein | SAMN05444682_101632 | Not Available | Positive | 758396 - 758836 | 16472.0 |
| bacteroides conjugative transposon tram protein | SAMN05444682_101633 | Not Available | Positive | 758851 - 760011 | 44342.3 |
| bacteroides conjugative transposon tran protein | SAMN05444682_101634 | Not Available | Positive | 760030 - 760878 | 32156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
