Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101615 | Not Available | Negative | 746190 - 746444 | 9496.78 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05444682_101616 | Not Available | Positive | 746465 - 747505 | 38608.3 |
| mobilisation protein (mobc) | SAMN05444682_101617 | Not Available | Positive | 747511 - 747921 | 15782.6 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05444682_101618 | Not Available | Positive | 747918 - 749072 | 43586.0 |
| chromosome partitioning protein | SAMN05444682_101619 | Not Available | Positive | 749106 - 749741 | 23698.0 |
| hypothetical protein | SAMN05444682_101620 | Not Available | Positive | 749738 - 750085 | 13401.6 |
| hypothetical protein | SAMN05444682_101621 | Not Available | Positive | 750082 - 750402 | 11783.0 |
| protein of unknown function | SAMN05444682_101622 | Not Available | Positive | 750410 - 750715 | 11150.6 |
| protein of unknown function | SAMN05444682_101623 | Not Available | Positive | 750787 - 751065 | 9498.69 |
| hypothetical protein | SAMN05444682_101624 | Not Available | Positive | 751062 - 751373 | 11473.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
