Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family enzyme | SAMN05444682_101595 | Not Available | Positive | 727378 - 728292 | 33603.4 |
| putative hydrolase of the had superfamily | SAMN05444682_101596 | Not Available | Negative | 728282 - 728920 | 24627.4 |
| Trna-met | Not Available | Not Available | Positive | 728986 - 729059 | Not Available |
| phage integrase sam-like domain-containing protein | SAMN05444682_101598 | Not Available | Positive | 729246 - 730547 | 51075.4 |
| hypothetical protein | SAMN05444682_101599 | Not Available | Negative | 730816 - 731022 | 8105.57 |
| hypothetical protein | SAMN05444682_101600 | Not Available | Positive | 731353 - 731709 | 13479.8 |
| hypothetical protein | SAMN05444682_101601 | Not Available | Positive | 731740 - 731847 | 4224.14 |
| rnd family efflux transporter, mfp subunit | SAMN05444682_101602 | Not Available | Positive | 731844 - 733112 | 46046.5 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN05444682_101603 | Not Available | Positive | 733126 - 736233 | 112928.0 |
| outer membrane protein tolc | SAMN05444682_101604 | Not Available | Positive | 736217 - 737425 | 46617.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
