Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine or glycine:cation symporter, agcs family | SAMN05444682_101585 | Not Available | Positive | 717981 - 718205 | 8006.88 |
| alanine or glycine:cation symporter, agcs family | SAMN05444682_101586 | Not Available | Positive | 718214 - 718882 | 23396.2 |
| pyrroline-5-carboxylate reductase | SAMN05444682_101587 | Not Available | Positive | 719038 - 719946 | 32415.9 |
| glutamate 5-kinase | SAMN05444682_101588 | Not Available | Positive | 719939 - 720736 | 29175.2 |
| glutamate-5-semialdehyde dehydrogenase | SAMN05444682_101589 | Not Available | Positive | 720795 - 721946 | 41965.3 |
| alanine or glycine:cation symporter, agcs family | SAMN05444682_101590 | Not Available | Negative | 722219 - 723673 | 52100.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444682_101591 | Not Available | Negative | 723726 - 724556 | 30939.0 |
| sodium/proton antiporter, nhaa family | SAMN05444682_101592 | Not Available | Negative | 724531 - 725766 | 44273.8 |
| putative transcriptional regulator | SAMN05444682_101593 | Not Available | Negative | 725898 - 726464 | 21071.9 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05444682_101594 | Not Available | Negative | 726516 - 727259 | 27099.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
