Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_10147 | Not Available | Positive | 59973 - 61601 | 61337.9 |
| heparinase ii/iii-like protein | SAMN05444682_10148 | Not Available | Positive | 61612 - 63606 | 74559.8 |
| hypothetical protein | SAMN05444682_10149 | Not Available | Positive | 63603 - 63860 | 9428.43 |
| unsaturated chondroitin disaccharide hydrolase | SAMN05444682_10150 | Not Available | Positive | 63975 - 64802 | 31424.9 |
| hypothetical protein | SAMN05444682_10151 | Not Available | Negative | 64927 - 65352 | 16146.1 |
| sulfite dehydrogenase (cytochrome) subunit sora apoprotein | SAMN05444682_10152 | Not Available | Negative | 65355 - 66593 | 45628.9 |
| hypothetical protein | SAMN05444682_10153 | Not Available | Positive | 67091 - 67255 | 5868.95 |
| protein of unknown function | SAMN05444682_10154 | Not Available | Positive | 67516 - 68175 | 26021.5 |
| hypothetical protein | SAMN05444682_10155 | Not Available | Positive | 68179 - 68679 | 20102.4 |
| hypothetical protein | SAMN05444682_10156 | Not Available | Negative | 69889 - 70095 | 7927.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
