Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101575 | Not Available | Negative | 711584 - 711850 | 9911.91 |
| site-specific dna recombinase | SAMN05444682_101576 | Not Available | Negative | 712202 - 712945 | 29040.2 |
| hypothetical protein | SAMN05444682_101577 | Not Available | Positive | 713197 - 713466 | 10100.0 |
| protein of unknown function | SAMN05444682_101578 | Not Available | Positive | 713542 - 714000 | 17252.9 |
| hypothetical protein | SAMN05444682_101579 | Not Available | Positive | 714005 - 714238 | 8646.98 |
| helix-turn-helix | SAMN05444682_101580 | Not Available | Negative | 714250 - 714654 | 15391.8 |
| hypothetical protein | SAMN05444682_101581 | Not Available | Positive | 714746 - 715615 | 32520.5 |
| hypothetical protein | SAMN05444682_101582 | Not Available | Positive | 715557 - 715766 | 8199.84 |
| protein of unknown function | SAMN05444682_101583 | Not Available | Negative | 715746 - 717017 | 49400.8 |
| transposase dde domain-containing protein | SAMN05444682_101584 | Not Available | Negative | 717191 - 717634 | 16973.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
