Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase | SAMN05444682_101555 | Not Available | Positive | 686364 - 687062 | 27639.5 |
| transcriptional regulator, tetr family | SAMN05444682_101556 | Not Available | Positive | 687290 - 687883 | 22683.7 |
| outer membrane protein tolc | SAMN05444682_101557 | Not Available | Positive | 687898 - 689268 | 50880.7 |
| rnd family efflux transporter, mfp subunit | SAMN05444682_101558 | Not Available | Positive | 689289 - 690368 | 38797.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444682_101559 | Not Available | Positive | 690415 - 693585 | 115623.0 |
| thymidylate synthase | SAMN05444682_101560 | Not Available | Positive | 693674 - 694495 | 31295.3 |
| dihydrofolate reductase | SAMN05444682_101561 | Not Available | Positive | 694506 - 695018 | 19626.0 |
| mechanosensitive ion channel | SAMN05444682_101562 | Not Available | Positive | 695002 - 695904 | 33922.6 |
| pantothenate kinase | SAMN05444682_101563 | Not Available | Negative | 695901 - 696857 | 36507.7 |
| methylglyoxal synthase | SAMN05444682_101564 | Not Available | Negative | 696841 - 697227 | 13993.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
