Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | SAMN05444682_101545 | Not Available | Negative | 675937 - 677190 | 46150.1 |
| dinb superfamily protein | SAMN05444682_101546 | Not Available | Positive | 677333 - 677953 | 23300.9 |
| nadph:quinone reductase | SAMN05444682_101547 | Not Available | Negative | 677925 - 678893 | 35201.4 |
| peptidase s46 | SAMN05444682_101548 | Not Available | Positive | 679241 - 681394 | 81494.0 |
| hypothetical protein | SAMN05444682_101549 | Not Available | Positive | 681535 - 681645 | 4234.97 |
| Trna-phe | Not Available | Not Available | Positive | 681840 - 681915 | Not Available |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05444682_101551 | Not Available | Positive | 682125 - 683192 | 39383.7 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05444682_101552 | Not Available | Negative | 683283 - 684278 | 35689.6 |
| hypothetical protein | SAMN05444682_101553 | Not Available | Negative | 684286 - 685134 | 32363.1 |
| 6-phosphofructokinase | SAMN05444682_101554 | Not Available | Negative | 685131 - 686114 | 34903.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
