Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fucose permease | SAMN05444682_101535 | Not Available | Negative | 663150 - 664424 | 46733.1 |
| glucokinase | SAMN05444682_101536 | Not Available | Negative | 664435 - 665358 | 32254.8 |
| galactosamine-6-phosphate isomerase | SAMN05444682_101537 | Not Available | Negative | 665355 - 666083 | 26330.6 |
| protein of unknown function | SAMN05444682_101538 | Not Available | Negative | 666086 - 666901 | 30370.8 |
| hypothetical protein | SAMN05444682_101539 | Not Available | Negative | 666940 - 668481 | 56920.6 |
| starch-binding associating with outer membrane | SAMN05444682_101540 | Not Available | Negative | 668503 - 670062 | 58435.4 |
| iron complex outermembrane recepter protein | SAMN05444682_101541 | Not Available | Negative | 670074 - 673268 | 117515.0 |
| fecr family protein | SAMN05444682_101542 | Not Available | Negative | 673388 - 674404 | 38271.5 |
| protein of unknown function | SAMN05444682_101543 | Not Available | Positive | 674534 - 675235 | 27011.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_101544 | Not Available | Negative | 675213 - 675749 | 20639.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
