Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose-h+ transport protein | SAMN05444682_101525 | Not Available | Positive | 652393 - 653433 | 37730.7 |
| hypothetical protein | SAMN05444682_101526 | Not Available | Negative | 653533 - 654930 | 52088.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05444682_101527 | Not Available | Positive | 655218 - 655979 | 27811.6 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05444682_101528 | Not Available | Positive | 655982 - 656755 | 28787.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05444682_101529 | Not Available | Positive | 656759 - 657751 | 35476.7 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05444682_101530 | Not Available | Negative | 657802 - 659121 | 49075.7 |
| hypothetical protein | SAMN05444682_101531 | Not Available | Positive | 659348 - 660997 | 60542.6 |
| hypothetical protein | SAMN05444682_101532 | Not Available | Positive | 661070 - 661267 | 7183.78 |
| Trna-val | Not Available | Not Available | Positive | 661670 - 661744 | Not Available |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN05444682_101534 | Not Available | Positive | 661915 - 663147 | 44133.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
