Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101515 | Not Available | Positive | 638774 - 638866 | 3649.36 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_101516 | Not Available | Positive | 638903 - 639466 | 22278.6 |
| fecr family protein | SAMN05444682_101517 | Not Available | Positive | 639534 - 640769 | 45790.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_101518 | Not Available | Positive | 641009 - 644368 | 123489.0 |
| starch-binding associating with outer membrane | SAMN05444682_101519 | Not Available | Positive | 644381 - 645919 | 57481.9 |
| hypothetical protein | SAMN05444682_101520 | Not Available | Positive | 646003 - 648951 | 109656.0 |
| xaa-pro aminopeptidase | SAMN05444682_101521 | Not Available | Positive | 648971 - 650140 | 42449.8 |
| polysaccharide deacetylase | SAMN05444682_101522 | Not Available | Positive | 650153 - 651076 | 34408.6 |
| l-rhamnose mutarotase | SAMN05444682_101523 | Not Available | Positive | 651099 - 651422 | 12750.4 |
| hypothetical protein | SAMN05444682_101524 | Not Available | Positive | 651443 - 652405 | 35582.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
