Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short c-terminal domain-containing protein | SAMN05444682_101505 | Not Available | Negative | 627230 - 627790 | 21396.8 |
| atp-binding cassette, subfamily b | SAMN05444682_101506 | Not Available | Positive | 628010 - 629746 | 63789.5 |
| atp-binding cassette, subfamily b | SAMN05444682_101507 | Not Available | Positive | 629736 - 631496 | 65473.1 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444682_101508 | Not Available | Negative | 631493 - 632155 | 24436.7 |
| seryl-trna synthetase | SAMN05444682_101509 | Not Available | Positive | 632362 - 633633 | 47603.7 |
| hypothetical protein | SAMN05444682_101510 | Not Available | Positive | 634043 - 634777 | 27076.3 |
| prepilin-type processing-associated h-x9-dg domain-containing protein | SAMN05444682_101511 | Not Available | Negative | 634662 - 635363 | 26271.2 |
| nicotinate phosphoribosyltransferase | SAMN05444682_101512 | Not Available | Negative | 635353 - 636525 | 44774.6 |
| lysophospholipase l1 | SAMN05444682_101513 | Not Available | Negative | 636569 - 637324 | 27714.0 |
| lysophospholipase l1 | SAMN05444682_101514 | Not Available | Positive | 637649 - 638767 | 41881.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
