Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101495 | Not Available | Negative | 617237 - 617734 | 18387.8 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05444682_101496 | Not Available | Positive | 617879 - 618682 | 29026.9 |
| bacteriocin-protection, ydei or ompd-associated | SAMN05444682_101497 | Not Available | Positive | 618697 - 619227 | 19903.3 |
| peroxiredoxin q/bcp | SAMN05444682_101498 | Not Available | Positive | 619253 - 619774 | 19040.6 |
| hypothetical protein | SAMN05444682_101499 | Not Available | Negative | 619814 - 620440 | 23275.6 |
| iron complex outermembrane recepter protein | SAMN05444682_101500 | Not Available | Negative | 620520 - 622844 | 86684.3 |
| integrase/recombinase xerd | SAMN05444682_101501 | Not Available | Negative | 622988 - 623881 | 33440.8 |
| small conductance mechanosensitive channel | SAMN05444682_101502 | Not Available | Positive | 624137 - 625009 | 31780.8 |
| riboflavin synthase alpha chain | SAMN05444682_101503 | Not Available | Negative | 625006 - 625596 | 21490.5 |
| apolipoprotein n-acyltransferase | SAMN05444682_101504 | Not Available | Negative | 625605 - 627209 | 60646.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
