Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | SAMN05444682_101485 | Not Available | Negative | 605459 - 605824 | 13859.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444682_101486 | Not Available | Negative | 605897 - 609082 | 115632.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444682_101487 | Not Available | Negative | 609123 - 610289 | 41509.5 |
| outer membrane protein tolc | SAMN05444682_101488 | Not Available | Negative | 610297 - 611631 | 50726.2 |
| transcriptional regulator, tetr family | SAMN05444682_101489 | Not Available | Negative | 611624 - 612256 | 24131.8 |
| hypothetical protein | SAMN05444682_101490 | Not Available | Negative | 612335 - 612475 | 5190.4 |
| superfamily ii dna and rna helicase | SAMN05444682_101491 | Not Available | Positive | 612503 - 613903 | 51655.1 |
| malate dehydrogenase (quinone) | SAMN05444682_101492 | Not Available | Positive | 614096 - 615613 | 55837.4 |
| nicotinamide mononucleotide transporter | SAMN05444682_101493 | Not Available | Positive | 615613 - 616212 | 22700.4 |
| acyl-coa dehydrogenase | SAMN05444682_101494 | Not Available | Positive | 616209 - 617240 | 38068.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
