Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10137 | Not Available | Positive | 49249 - 49434 | 7129.72 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05444682_10138 | Not Available | Positive | 49447 - 50292 | 31089.1 |
| cytochrome c oxidase accessory protein fixg | SAMN05444682_10139 | Not Available | Positive | 50311 - 51672 | 51053.7 |
| fixh protein | SAMN05444682_10140 | Not Available | Positive | 51727 - 51930 | 7675.26 |
| hypothetical protein | SAMN05444682_10141 | Not Available | Positive | 51937 - 52641 | 25273.3 |
| peptidase family s41 | SAMN05444682_10142 | Not Available | Negative | 52800 - 54218 | 54327.3 |
| hypothetical protein | SAMN05444682_10143 | Not Available | Negative | 54245 - 54391 | 5466.72 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10144 | Not Available | Positive | 54465 - 55067 | 23645.9 |
| fecr family protein | SAMN05444682_10145 | Not Available | Positive | 55168 - 56379 | 44599.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10146 | Not Available | Positive | 56572 - 59955 | 123709.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
