Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101465 | Not Available | Negative | 582777 - 583796 | 39216.5 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05444682_101466 | Not Available | Negative | 583805 - 585511 | 66423.2 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05444682_101467 | Not Available | Negative | 585529 - 585921 | 14947.5 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN05444682_101468 | Not Available | Negative | 586293 - 587558 | 45139.8 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN05444682_101469 | Not Available | Negative | 587583 - 590384 | 106109.0 |
| deoxyribodipyrimidine photo-lyase | SAMN05444682_101470 | Not Available | Negative | 590474 - 591727 | 48291.8 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444682_101471 | Not Available | Positive | 591974 - 592849 | 32850.4 |
| hypothetical protein | SAMN05444682_101472 | Not Available | Positive | 592862 - 593797 | 33853.2 |
| hypothetical protein | SAMN05444682_101473 | Not Available | Negative | 593781 - 594434 | 23557.9 |
| iron complex outermembrane recepter protein | SAMN05444682_101474 | Not Available | Positive | 594502 - 596622 | 78371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
