Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_101455 | Not Available | Positive | 571841 - 572305 | 16674.0 |
| protein translocase subunit yajc | SAMN05444682_101456 | Not Available | Positive | 572380 - 572706 | 11738.7 |
| hypothetical protein | SAMN05444682_101457 | Not Available | Positive | 572770 - 573717 | 36104.6 |
| dephospho-coa kinase | SAMN05444682_101458 | Not Available | Positive | 573714 - 574313 | 22322.0 |
| putative mrna 3-end processing factor | SAMN05444682_101459 | Not Available | Positive | 574313 - 575266 | 36464.6 |
| phospholipase c | SAMN05444682_101460 | Not Available | Negative | 575272 - 577761 | 93392.8 |
| glycerol uptake facilitator protein | SAMN05444682_101461 | Not Available | Negative | 577848 - 578588 | 25282.2 |
| glycerol kinase | SAMN05444682_101462 | Not Available | Negative | 578721 - 580208 | 53727.9 |
| glycerol-3-phosphate dehydrogenase | SAMN05444682_101463 | Not Available | Negative | 580236 - 581843 | 59384.9 |
| transcriptional regulator, deor family | SAMN05444682_101464 | Not Available | Positive | 582029 - 582790 | 27663.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
