Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_101445 | Not Available | Positive | 563514 - 564215 | 24478.5 |
| lipid-binding putative hydrolase | SAMN05444682_101446 | Not Available | Positive | 564223 - 564747 | 19341.3 |
| large subunit ribosomal protein l9 | SAMN05444682_101447 | Not Available | Negative | 565514 - 565957 | 16310.9 |
| small subunit ribosomal protein s18 | SAMN05444682_101448 | Not Available | Negative | 565972 - 566235 | 10131.5 |
| small subunit ribosomal protein s6 | SAMN05444682_101449 | Not Available | Negative | 566235 - 566672 | 16960.4 |
| lsu ribosomal protein l21p | SAMN05444682_101450 | Not Available | Positive | 566750 - 567061 | 11425.1 |
| large subunit ribosomal protein l27 | SAMN05444682_101451 | Not Available | Positive | 567111 - 567776 | 23323.7 |
| atp-binding cassette, subfamily b | SAMN05444682_101452 | Not Available | Negative | 567866 - 569695 | 68698.7 |
| leucine dehydrogenase | SAMN05444682_101453 | Not Available | Positive | 569723 - 570811 | 39081.9 |
| nusb antitermination factor | SAMN05444682_101454 | Not Available | Positive | 570861 - 571808 | 36879.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
