Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101435 | Not Available | Negative | 550902 - 551459 | 20574.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05444682_101436 | Not Available | Negative | 551475 - 552455 | 36957.6 |
| gtp-binding protein lepa | SAMN05444682_101437 | Not Available | Positive | 552627 - 554417 | 67042.2 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN05444682_101438 | Not Available | Positive | 554428 - 555306 | 31563.3 |
| hypothetical protein | SAMN05444682_101439 | Not Available | Positive | 555367 - 555771 | 14322.3 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05444682_101440 | Not Available | Positive | 556031 - 556705 | 25425.7 |
| signal transduction histidine kinase | SAMN05444682_101441 | Not Available | Positive | 556706 - 557986 | 49779.8 |
| hypothetical protein | SAMN05444682_101442 | Not Available | Negative | 557974 - 558246 | 10297.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_101443 | Not Available | Positive | 558744 - 561980 | 118977.0 |
| starch-binding associating with outer membrane | SAMN05444682_101444 | Not Available | Positive | 561996 - 563480 | 55047.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
