Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05444682_101425 | Not Available | Positive | 531057 - 533057 | 75716.6 |
| two component transcriptional regulator, lyttr family | SAMN05444682_101426 | Not Available | Positive | 533111 - 533836 | 27458.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05444682_101427 | Not Available | Positive | 533936 - 544762 | 385542.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05444682_101428 | Not Available | Positive | 544792 - 545688 | 32684.2 |
| prolipoprotein diacylglyceryl transferase | SAMN05444682_101429 | Not Available | Negative | 545683 - 546519 | 32140.8 |
| ssu ribosomal protein s6p modification protein | SAMN05444682_101430 | Not Available | Negative | 546566 - 547492 | 33585.1 |
| uncharacterized conserved protein | SAMN05444682_101431 | Not Available | Negative | 547528 - 547959 | 16436.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05444682_101432 | Not Available | Negative | 547979 - 549157 | 43075.4 |
| ompa-ompf porin, oop family | SAMN05444682_101433 | Not Available | Negative | 549167 - 549739 | 20804.8 |
| predicted dehydrogenase | SAMN05444682_101434 | Not Available | Positive | 549789 - 550898 | 41443.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
