Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin | SAMN05444682_101405 | Not Available | Positive | 506746 - 507270 | 20637.4 |
| outer membrane protein beta-barrel family protein | SAMN05444682_101406 | Not Available | Positive | 507518 - 510160 | 99823.4 |
| putative nad(p)h quinone oxidoreductase, pig3 family | SAMN05444682_101407 | Not Available | Positive | 510157 - 511131 | 35027.4 |
| alpha-1,2-mannosidase, putative | SAMN05444682_101408 | Not Available | Positive | 511226 - 513514 | 86395.7 |
| arac-type dna-binding protein | SAMN05444682_101409 | Not Available | Negative | 513540 - 514406 | 33167.7 |
| mfs transporter, fhs family, l-fucose permease | SAMN05444682_101410 | Not Available | Positive | 514577 - 515836 | 45053.0 |
| l-rhamnose mutarotase | SAMN05444682_101411 | Not Available | Positive | 515879 - 516232 | 13618.1 |
| altronate hydrolase | SAMN05444682_101412 | Not Available | Positive | 516207 - 517883 | 60374.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_101413 | Not Available | Positive | 517929 - 518699 | 27547.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444682_101414 | Not Available | Positive | 518788 - 519642 | 30813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
