Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101385 | Not Available | Negative | 485368 - 486105 | 28118.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444682_101386 | Not Available | Positive | 486173 - 486829 | 24855.1 |
| muts domain iii | SAMN05444682_101387 | Not Available | Positive | 486886 - 488694 | 67602.8 |
| ssra-binding protein | SAMN05444682_101388 | Not Available | Negative | 488704 - 489159 | 17582.4 |
| iron (metal) dependent repressor, dtxr family | SAMN05444682_101389 | Not Available | Negative | 489244 - 489906 | 24836.6 |
| succinyl-coa synthetase alpha subunit | SAMN05444682_101390 | Not Available | Negative | 490060 - 490938 | 30063.5 |
| spou rrna methylase family protein | SAMN05444682_101391 | Not Available | Negative | 491020 - 491547 | 19580.7 |
| ssu ribosomal protein s20p | SAMN05444682_101392 | Not Available | Positive | 491714 - 491968 | 9601.82 |
| protein of unknown function | SAMN05444682_101393 | Not Available | Negative | 492085 - 492948 | 32246.8 |
| transcriptional regulator, arac family | SAMN05444682_101394 | Not Available | Negative | 492977 - 493789 | 31698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
