Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette protein, chvd family | SAMN05444682_10127 | Not Available | Positive | 38083 - 39768 | 63112.1 |
| pas domain s-box-containing protein | SAMN05444682_10128 | Not Available | Positive | 39765 - 40958 | 44367.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_10129 | Not Available | Positive | 40989 - 42029 | 39580.7 |
| d-lactate dehydrogenase | SAMN05444682_10130 | Not Available | Positive | 42209 - 42646 | 15878.1 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444682_10131 | Not Available | Positive | 42654 - 44015 | 51310.4 |
| cu+-exporting atpase | SAMN05444682_10132 | Not Available | Positive | 44012 - 46408 | 88084.4 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05444682_10133 | Not Available | Positive | 46405 - 46581 | 6646.91 |
| hypothetical protein | SAMN05444682_10134 | Not Available | Negative | 46598 - 46903 | 11861.7 |
| hypothetical protein | SAMN05444682_10135 | Not Available | Positive | 46918 - 47031 | 4338.42 |
| cytochrome c oxidase cbb3-type subunit i/ii | SAMN05444682_10136 | Not Available | Positive | 47104 - 49230 | 80534.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
