Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101375 | Not Available | Positive | 472424 - 473515 | 38955.5 |
| predicted arabinose efflux permease, mfs family | SAMN05444682_101376 | Not Available | Positive | 473518 - 474753 | 45231.9 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | SAMN05444682_101377 | Not Available | Positive | 474750 - 475700 | 35441.4 |
| l-aspartate 1-decarboxylase | SAMN05444682_101378 | Not Available | Negative | 475723 - 476091 | 13445.0 |
| hypothetical protein | SAMN05444682_101379 | Not Available | Negative | 476123 - 477100 | 35803.8 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444682_101380 | Not Available | Positive | 477340 - 480372 | 112034.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05444682_101381 | Not Available | Positive | 480384 - 481538 | 44760.5 |
| hypothetical protein | SAMN05444682_101382 | Not Available | Negative | 481529 - 482278 | 27560.3 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN05444682_101383 | Not Available | Positive | 482484 - 482873 | 14051.3 |
| replication restart dna helicase pria | SAMN05444682_101384 | Not Available | Positive | 482891 - 485374 | 92734.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
