Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, fadr family | SAMN05444682_101365 | Not Available | Positive | 457179 - 457883 | 27085.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_101366 | Not Available | Positive | 458014 - 461184 | 116023.0 |
| starch-binding associating with outer membrane | SAMN05444682_101367 | Not Available | Positive | 461198 - 462652 | 54677.1 |
| sialidase-1 | SAMN05444682_101368 | Not Available | Positive | 462684 - 463886 | 43672.7 |
| iduronate 2-sulfatase | SAMN05444682_101369 | Not Available | Positive | 463901 - 465412 | 56323.9 |
| uncharacterized sulfatase | SAMN05444682_101370 | Not Available | Positive | 465419 - 466813 | 52144.2 |
| sialidase-1 | SAMN05444682_101371 | Not Available | Positive | 466825 - 468519 | 61755.6 |
| arylsulfatase a | SAMN05444682_101372 | Not Available | Positive | 468516 - 469976 | 54951.7 |
| sialate o-acetylesterase | SAMN05444682_101373 | Not Available | Positive | 469996 - 471402 | 51456.0 |
| n-acetylneuraminate lyase | SAMN05444682_101374 | Not Available | Positive | 471453 - 472385 | 33549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
