Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbd | SAMN05444682_101355 | Not Available | Positive | 446374 - 446781 | 15269.8 |
| outer membrane transport energization protein tonb | SAMN05444682_101356 | Not Available | Positive | 446878 - 447699 | 29458.2 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05444682_101357 | Not Available | Positive | 447724 - 449031 | 47930.6 |
| l-asparaginase | SAMN05444682_101358 | Not Available | Negative | 449042 - 450058 | 37802.4 |
| tatd dnase family protein | SAMN05444682_101359 | Not Available | Negative | 450055 - 450825 | 28600.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05444682_101360 | Not Available | Negative | 450922 - 451890 | 34784.6 |
| phosphoesterase recj domain-containing protein | SAMN05444682_101361 | Not Available | Negative | 451903 - 452916 | 38065.4 |
| dihydroxyacid dehydratase | SAMN05444682_101362 | Not Available | Positive | 453129 - 454832 | 61385.7 |
| cupin domain-containing protein | SAMN05444682_101363 | Not Available | Negative | 454837 - 455736 | 34528.8 |
| hypothetical protein | SAMN05444682_101364 | Not Available | Negative | 455787 - 456992 | 44436.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
