Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SAMN05444682_101345 | Not Available | Positive | 431918 - 432943 | 36947.5 |
| predicted transcriptional regulator | SAMN05444682_101346 | Not Available | Positive | 433055 - 433441 | 14687.7 |
| blar1 peptidase m56 | SAMN05444682_101347 | Not Available | Positive | 433448 - 435121 | 63372.3 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN05444682_101348 | Not Available | Positive | 435502 - 436056 | 21235.8 |
| aspartate carbamoyltransferase | SAMN05444682_101349 | Not Available | Positive | 436053 - 436991 | 34561.2 |
| tetratricopeptide repeat-containing protein | SAMN05444682_101350 | Not Available | Positive | 437137 - 440175 | 116246.0 |
| tetratricopeptide repeat-containing protein | SAMN05444682_101351 | Not Available | Positive | 440191 - 442728 | 96099.6 |
| hypothetical protein | SAMN05444682_101352 | Not Available | Positive | 442753 - 444513 | 65372.8 |
| sporulation related domain-containing protein | SAMN05444682_101353 | Not Available | Positive | 444602 - 445594 | 35733.9 |
| outer membrane transport energization protein exbb | SAMN05444682_101354 | Not Available | Positive | 445658 - 446359 | 25205.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
