Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | SAMN05444682_101335 | Not Available | Negative | 419631 - 420917 | 48028.6 |
| hypothetical protein | SAMN05444682_101336 | Not Available | Positive | 420962 - 421078 | 4268.31 |
| predicted transcriptional regulator | SAMN05444682_101337 | Not Available | Positive | 421222 - 421632 | 16040.1 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN05444682_101338 | Not Available | Positive | 421635 - 423134 | 57557.3 |
| peptidyl-trna hydrolase, pth1 family | SAMN05444682_101339 | Not Available | Negative | 423149 - 423715 | 21125.6 |
| large subunit ribosomal protein l25 | SAMN05444682_101340 | Not Available | Negative | 423812 - 424402 | 21591.2 |
| ribose-phosphate pyrophosphokinase | SAMN05444682_101341 | Not Available | Negative | 424461 - 425405 | 34397.4 |
| Trna-gln | Not Available | Not Available | Positive | 425513 - 425586 | Not Available |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444682_101343 | Not Available | Positive | 425752 - 428778 | 114393.0 |
| protein of unknown function | SAMN05444682_101344 | Not Available | Positive | 428898 - 431921 | 114384.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
