Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | SAMN05444682_101326 | Not Available | Positive | 409715 - 410668 | 34719.5 |
| abc-2 type transport system permease protein | SAMN05444682_101327 | Not Available | Positive | 410671 - 411846 | 44150.9 |
| nadh dehydrogenase subunit n | SAMN05444682_101328 | Not Available | Negative | 411862 - 413358 | 54053.6 |
| nadh dehydrogenase subunit m | SAMN05444682_101329 | Not Available | Negative | 413375 - 414979 | 58613.6 |
| nadh dehydrogenase subunit l | SAMN05444682_101330 | Not Available | Negative | 414976 - 416973 | 72867.3 |
| nadh dehydrogenase subunit k | SAMN05444682_101331 | Not Available | Negative | 416985 - 417290 | 10957.9 |
| nadh dehydrogenase subunit j | SAMN05444682_101332 | Not Available | Negative | 417287 - 417835 | 19879.0 |
| nadh-quinone oxidoreductase subunit i | SAMN05444682_101333 | Not Available | Negative | 417835 - 418395 | 20897.3 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 418661 - 418746 | 18.01 |
| nadh dehydrogenase subunit h | SAMN05444682_101334 | Not Available | Negative | 418415 - 419488 | 39318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
