Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN05444682_101316 | Not Available | Positive | 399010 - 400509 | 56512.7 |
| alpha-mannosidase | SAMN05444682_101317 | Not Available | Positive | 400513 - 403095 | 97535.0 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN05444682_101318 | Not Available | Positive | 403103 - 404263 | 43539.7 |
| hypothetical protein | SAMN05444682_101319 | Not Available | Negative | 404307 - 404867 | 20707.0 |
| hypothetical protein | SAMN05444682_101320 | Not Available | Negative | 404879 - 405520 | 23843.7 |
| hypothetical protein | SAMN05444682_101321 | Not Available | Positive | 405834 - 406106 | 10070.9 |
| hypothetical protein | SAMN05444682_101322 | Not Available | Negative | 406110 - 406487 | 14076.9 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444682_101323 | Not Available | Negative | 406527 - 407699 | 43857.9 |
| dna-binding transcriptional regulator, marr family | SAMN05444682_101324 | Not Available | Positive | 407806 - 408246 | 16898.3 |
| outer membrane protein tolc | SAMN05444682_101325 | Not Available | Positive | 408306 - 409691 | 51584.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
