Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_03125 | SAMN05444682_107201 | Not Available | Negative | 3791399 - 3791737 | Not Available |
| hypothetical protein | SAMN05444682_107202 | Not Available | Negative | 3791749 - 3791964 | 8511.23 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_107203 | Not Available | Positive | 3792166 - 3792762 | 21441.7 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN05444682_107204 | Not Available | Positive | 3792939 - 3793712 | 29613.2 |
| succinate dehydrogenase subunit a | SAMN05444682_107205 | Not Available | Positive | 3793764 - 3795695 | 71707.1 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN05444682_107206 | Not Available | Positive | 3795808 - 3796578 | 27843.4 |
| hamp domain-containing protein | SAMN05444682_107207 | Not Available | Positive | 3796670 - 3800401 | 142227.0 |
| growth-arrest specific micro-tubule binding | SAMN05444682_107208 | Not Available | Negative | 3800409 - 3801347 | 35424.7 |
| gdpmannose 4,6-dehydratase | SAMN05444682_107209 | Not Available | Negative | 3801451 - 3802590 | 43128.5 |
| glucose-1-phosphate thymidylyltransferase | SAMN05444682_107210 | Not Available | Negative | 3802595 - 3803473 | 31998.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
