Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | SAMN05444682_107161 | Not Available | Negative | 3739089 - 3741173 | 77868.3 |
| arylsulfatase a | SAMN05444682_107162 | Not Available | Negative | 3741222 - 3742613 | 52224.3 |
| protein of unknown function | SAMN05444682_107163 | Not Available | Negative | 3742654 - 3743331 | 24532.0 |
| starch-binding associating with outer membrane | SAMN05444682_107164 | Not Available | Negative | 3743350 - 3745194 | 69639.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_107165 | Not Available | Negative | 3745220 - 3748345 | 117188.0 |
| l-alanine-dl-glutamate epimerase | SAMN05444682_107166 | Not Available | Negative | 3748392 - 3749600 | 44790.8 |
| d-tagatose 3-epimerase | SAMN05444682_107167 | Not Available | Negative | 3749655 - 3750524 | 31870.1 |
| predicted dehydrogenase | SAMN05444682_107168 | Not Available | Negative | 3750543 - 3751652 | 41131.9 |
| type 1 glutamine amidotransferase (gatase1) | SAMN05444682_107169 | Not Available | Negative | 3751688 - 3752404 | 26508.8 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_107170 | Not Available | Negative | 3752423 - 3755791 | 123984.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
