Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | SAMN05444682_107151 | Not Available | Positive | 3726173 - 3728095 | 69128.4 |
| dtdp-glucose pyrophosphorylase | SAMN05444682_107152 | Not Available | Negative | 3728184 - 3729095 | 34318.6 |
| hypothetical protein | SAMN05444682_107153 | Not Available | Negative | 3729196 - 3730740 | 56128.8 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05444682_107154 | Not Available | Negative | 3730810 - 3731625 | 29189.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05444682_107155 | Not Available | Negative | 3731639 - 3732991 | 48823.4 |
| transcriptional regulator, deor family | SAMN05444682_107156 | Not Available | Positive | 3733254 - 3734003 | 27170.3 |
| glycosyl hydrolases family 43 | SAMN05444682_107157 | Not Available | Negative | 3734012 - 3735124 | 41516.4 |
| acetyl esterase/lipase | SAMN05444682_107158 | Not Available | Negative | 3735129 - 3735980 | 31682.0 |
| iduronate 2-sulfatase | SAMN05444682_107159 | Not Available | Negative | 3736074 - 3737648 | 58483.7 |
| uncharacterized sulfatase | SAMN05444682_107160 | Not Available | Negative | 3737660 - 3739084 | 53580.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
