Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN05444682_101296 | Not Available | Negative | 360948 - 362384 | 53754.6 |
| starch-binding associating with outer membrane | SAMN05444682_101297 | Not Available | Negative | 362386 - 363945 | 58638.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_101298 | Not Available | Negative | 364049 - 367162 | 114070.0 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444682_101299 | Not Available | Negative | 367365 - 368732 | 49892.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05444682_101300 | Not Available | Positive | 369183 - 371978 | 104512.0 |
| glpgli family protein | SAMN05444682_101301 | Not Available | Positive | 371984 - 372766 | 29455.3 |
| hypothetical protein | SAMN05444682_101302 | Not Available | Positive | 373058 - 374677 | 62346.1 |
| lysophospholipase l1 | SAMN05444682_101303 | Not Available | Positive | 374857 - 376263 | 53185.5 |
| alpha-1,2-mannosidase, putative | SAMN05444682_101304 | Not Available | Positive | 376302 - 378647 | 88068.0 |
| alpha-1,2-mannosidase, putative | SAMN05444682_101305 | Not Available | Positive | 378692 - 380965 | 85969.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
