Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444682_107121 | Not Available | Positive | 3693751 - 3694515 | 27182.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444682_107122 | Not Available | Positive | 3694525 - 3695355 | 30495.0 |
| hypothetical protein | SAMN05444682_107123 | Not Available | Negative | 3695398 - 3697092 | 65774.5 |
| hypothetical protein | SAMN05444682_107124 | Not Available | Negative | 3697089 - 3697820 | 27960.2 |
| hypothetical protein | SAMN05444682_107125 | Not Available | Positive | 3697926 - 3698321 | 14892.9 |
| peptidase t. metallo peptidase. merops family m20b | SAMN05444682_107126 | Not Available | Positive | 3698329 - 3699591 | 46007.6 |
| nitroreductase | SAMN05444682_107127 | Not Available | Positive | 3699604 - 3700179 | 21698.9 |
| protein of unknown function | SAMN05444682_107128 | Not Available | Positive | 3700277 - 3700690 | 15714.1 |
| hypothetical protein | SAMN05444682_107129 | Not Available | Negative | 3700723 - 3701370 | 24583.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_107130 | Not Available | Negative | 3701360 - 3701914 | 21850.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
